I’m a Ph.D. candidate in the Bioinformatics and Systems Biology program at the University of California, San Diego, working with Siavash Mirarab.
My research interests broadly fall under computational biology, more specifically metagenomics, phylogenetics, and phylogenomics, see here for a more detailed description.
- news / Poster at ProbGen 2026
- news / SPrUCE published in Molecular Ecology Resources
- news / krepp published in Genome Biology
- posts / Binning mitochondrial reads from skimming data using krepp
- news / Talks at IMSI workshop on alignments and phylogenies
- news / I presented our latest tool for phyloegentic placement in RECOMB 2025
- news / FlyVISTA published in Science Advances
- news / Our paper has been accepted in RECOMB 2025
- posts / Mapping mitochondrial baits to taxonomic groups using KRANK
- news / Our paper has been published in Genome Research
- posts / basty for Behavioral Analysis of Sleep in Drosophila melanogaster
- news / I attended RECOMB 2024 and presented KRANK
- news / I gave a short talk in BioSys 2024
- news / CONSULT-II has been published in Bioinformatics
- news / KRANK has been accepted in RECOMB 2024
- news / MuDCoD has been published in Bioinformatics
- news / Our paper has been published in Natural Language Engineering
- news / CONSULT-II won the best paper award
- posts / CONSULT for Contamination Removal
- news / I successfully defended my MSc thesis
- notes / Percolation Theory in Network Science
- notes / Categorical Cross Entropy
- news / I presented a poster and a spotlight presentation at MLCB 2021