Talks & Presentations
Conference Presentations
-
Contemporary Challenges in Large-Scale Sequence Alignments & Phylogenies
- IMSI (UChicago), Chicago [August, 2025]
- Read-genome distance calculation & phylogenetic placement using krepp [tutorial] [slides, recording]
- Mapping strongly discordant regions on the genome using hidden Markov models [short talk] [slides, recording]
-
RECOMB 2025
- Yonsei University, Seoul [April, 2025]
- Estimating read-genome distances using homologous k-mers (and genome-wide phylogenetic placement) [slides]
-
RECOMB 2024
- MIT, Boston [April, 2024]
- Memory-bound and taxonomy-aware k-mer selection for large reference databases [slides]
-
BioSys 2024 (in conjunction with ASPLOS 2024)
- La Jolla [April, 2024]
- Memory-bound and taxonomy-aware k-mer selection for large reference databases [slides, recording]
-
RECOMB-CG 2023
- ITU, Istanbul [April, 2023]
- CONSULT-II: Taxonomic identification using locality sensitive hashing [slides]
-
MLCB 2021
- Virtual Conference [October, 2021]
- MuDCoD: Multi-subject community detection in dynamic gene networks [short talk] [slides]
-
Signal Processing and Communications Applications (SIU) 2020
- Virtual Conference [September, 2020]
- Active Learning for Turkish Text Classification
Invited Talks & Seminars
Miscellaneous
Posters
-
ProbGen (Probabilistic Modeling in Genomics) 2026
- UC Berkeley, Berkeley [March, 2025]
- A probabilistic framework for sequence distances & genome-wide (phylogenetic) pattern matching [poster]
-
Contemporary Challenges in Large-Scale Sequence Alignments & Phylogenies
- IMSI (UChicago), Chicago [August, 2025]
- Mapping strongly discordant regions on the genome using hidden markov models [poster]
-
MLCB 2021
- Virtual Conference [October, 2021]
- MuDCoD: Multi-subject community detection in dynamic gene networks [poster]